Compare Global Phage-Host interactions

Phage Gene Expression

Phage Heatmap Dataset 1

Heatmap of all phage genes based on mean TPM values per time point normalized by z-score and clustered by similarity of gene expression over the time course of infection.

Using the variance range slider, you can focus on genes with the highest or lowest variance, or define a specific variance range of interest.

Phage Heatmap Dataset 2

Heatmap of all phage genes based on mean TPM values per time point normalized by z-score and clustered by similarity of gene expression over the time course of infection.

Using the variance range slider, you can focus on genes with the highest or lowest variance, or define a specific variance range of interest.

Host Heatmap Dataset 1

Heatmap of all host genes based on mean TPM values per time point normalized by z-score and clustered by similarity of gene expression over the time course of infection.

Using the variance range slider, you can focus on genes with the highest or lowest variance, or define a specific variance range of interest.

Host Heatmap Dataset 2

Heatmap of all host genes based on mean TPM values per time point normalized by z-score and clustered by similarity of gene expression over the time course of infection.

Using the variance range slider, you can focus on genes with the highest or lowest variance, or define a specific variance range of interest.

Gene selection

Phage Genome D1

Visualization of the selected Phage Genome.

The colored areas represent the selected genes, while the gray blocks represent the genes that are currently not selected.
Each gene can be clicked to select/deselect it for the view below.

Please note: the data displayed in the genome viewer is sourced directly from GFF files, without cleaning or validation. We do not take responsibility for its accuracy or biological correctness

Phage Genome D2

Visualization of the selected Phage Genome.

The colored areas represent the selected genes, while the gray blocks represent the genes that are currently not selected.
Each gene can be clicked to select/deselect it for the view below.

Please note: the data displayed in the genome viewer is sourced directly from GFF files, without cleaning or validation. We do not take responsibility for its accuracy or biological correctness

Phage Genes D1

Phage gene expression profiles over the time course of infection based on mean TPM values normalized to the highest mean TPM value per gene.

Phage Genes D2

Phage gene expression profiles over the time course of infection based on mean TPM values normalized to the highest mean TPM value per gene.

Selected Phage Gene Heatmap D1

Heatmap of all selected phage genes based on mean TPM values per time point normalized by z-score and clustered by similarity of gene expression over the time course of infection.

Selected Phage Gene Heatmap D2

Heatmap of all selected phage genes based on mean TPM values per time point normalized by z-score and clustered by similarity of gene expression over the time course of infection.

Host Genes D1

Host gene expression profiles over the time course of infection based on mean TPM values normalized to the highest mean TPM value per gene.

Host Genes D2

Host gene expression profiles over the time course of infection based on mean TPM values normalized to the highest mean TPM value per gene.

Selected Host Gene Heatmap D1

Heatmap of all selected host genes based on mean TPM values per time point normalized by z-score and clustered by similarity of gene expression over the time course of infection.

Selected Host Gene Heatmap D2

Heatmap of all selected host genes based on mean TPM values per time point normalized by z-score and clustered by similarity of gene expression over the time course of infection.